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c9ed8be2f2
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Modified PDF plotting to allow for plotting true histogram with and without normalization as default, with KDE as a choice. Modified function calls accordingly.
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2025-08-24 14:30:38 +02:00 |
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ebd31a91fb
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Fully validated code - droplets to stripes analysis across multiple folders completed successfully. 2D analysis, PCA and lattice reconstruction remain to be implemented.
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2025-08-24 10:04:37 +02:00 |
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bc1c3e287a
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Minor bugfixes from last commit.
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2025-08-23 21:23:33 +02:00 |
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2abbefb3a7
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Added safeguards against out-of-memory errors by prior estimation of required RAM - still needs an alternative method to read and analyse datasets too large to load in to memory.
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2025-08-23 21:11:42 +02:00 |
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ae9af32eda
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Latest complete update to scripts to save data and figures.
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2025-08-23 19:53:58 +02:00 |
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db298413d1
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Modified to save analysis data that once done does not need to be redone if it needs to be plotted again or differently.
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2025-08-23 18:30:07 +02:00 |
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628a29971f
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Adjusted parameters for analysis.
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2025-08-20 17:48:05 +02:00 |
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dc360ed659
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Added more verbose text to display in console, new scripts to analyse Stripe to Droplet transition.
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2025-08-20 12:31:15 +02:00 |
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b0f45aa7e6
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Bugfixes, general improvements.
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2025-08-19 12:28:58 +02:00 |
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33573b5810
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Another bugfix that prevented the saving of OD images.
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2025-08-19 01:15:50 +02:00 |
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5ff4cbbc2d
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Bug fixes, exception handling, new measurement analysis scripts.
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2025-08-19 00:52:59 +02:00 |
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1a99ff2c2a
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Change in magnification, added scripts to analyse BEC to Droplets dataset.
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2025-08-18 16:12:49 +02:00 |
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1f7526c594
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Modifications in batch analysis script to take sequence name, date and run number, to reuse data saved in workspace and enhancements to image viewer.
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2025-08-18 16:03:25 +02:00 |
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f52666d929
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Previous standalone version of data analysis routines added as part of legacy code archive.
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2025-08-18 10:29:17 +02:00 |
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3115554b27
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MAJOR restructuring of Data-Analyzer: code re-written to be highly modular.
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2025-08-18 10:24:55 +02:00 |
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be84ba8bd5
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Revert "MAJOR restructuring: Code rewritten to be highly modular."
This reverts commit f61ab4deff.
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2025-08-18 00:27:27 +02:00 |
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f61ab4deff
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MAJOR restructuring: Code rewritten to be highly modular.
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2025-08-18 00:14:18 +02:00 |
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ea9b40793f
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Revert "MAJOR restructuring: code rewritten to be highly modular."
This reverts commit 9011919780.
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2025-08-18 00:10:17 +02:00 |
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9011919780
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MAJOR restructuring: code rewritten to be highly modular.
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2025-08-17 23:40:06 +02:00 |
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3519f0de82
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MAJOR restructuring: code now rewritten to be highly modular.
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2025-08-17 23:37:38 +02:00 |
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ea14ccddf4
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Latest script to carry out PCA on experimental dataset
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2025-08-14 17:54:47 +02:00 |
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832431bac5
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Latest analysis scripts
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2025-08-12 20:07:50 +02:00 |
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e3571c12b0
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Modified PCA analysis script to run on simulated data.
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2025-08-11 15:23:16 +02:00 |
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Karthik
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1d178a3d75
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Test script for analysing experimental data with PCA - requires further development.
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2025-08-11 12:35:02 +02:00 |
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Karthik
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24392f2e35
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Corrected code to more accurately depict the distribution of the order parameter
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2025-08-08 00:15:36 +02:00 |
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4a4ddf0e9c
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New script added to better understand cumulants.
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2025-08-07 19:00:23 +02:00 |
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304758bebe
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Added new routine to simulate distribution of data and compute its cumulants, additionally made minor modifications to experimental data analysis routines.
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2025-08-06 19:06:02 +02:00 |
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b91dba7165
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New routines to compute PDF, cumulants of order parameter
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2025-07-31 20:28:08 +02:00 |
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7a6c3f9197
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Updated script to compute with the new full g2, max g2 definitions for simulation results.
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2025-07-21 17:35:20 +02:00 |
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f6981b9233
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New routine to plot insitu images across runs, new script to calculate interference pattern, potential for an optical accordion lattice.
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2025-07-18 22:10:05 +02:00 |
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64229ecd69
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Folder restructuring
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2025-07-11 16:34:40 +02:00 |
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96c0a50beb
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Changes to analyze datasets
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2025-07-11 16:33:03 +02:00 |
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25e3bade5e
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Added heatmap plots of the different quantities
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2025-07-11 01:07:26 +02:00 |
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195e65ec5f
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MAJOR update - many changes!
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2025-07-10 23:49:03 +02:00 |
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6b4dd299f5
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Aesthetic changes
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2025-07-08 17:15:41 +02:00 |
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39aa2072cf
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Added new script to extract correlation only in a window, modified autocorrelation script with new definition of g2 and with unnormalized angular spectral distribution
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2025-07-08 16:50:15 +02:00 |
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47863ef02d
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Changes to plotting - changed to better colormaps.
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2025-07-07 18:07:17 +02:00 |
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cc72fb2ccc
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MAJOR update - many additions to plotting
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2025-07-07 17:04:19 +02:00 |
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Karthik
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cd48c0ab9b
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New Fourier analysis script
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2025-07-05 14:04:08 +02:00 |
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d874270a62
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New script to plot SS regimes and mods to analyze new data
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2025-06-26 21:45:23 +02:00 |
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0ddc8bda00
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Added way to match TF radii by matching atom number in addition to scaling magnification
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2025-06-10 18:44:21 +02:00 |
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b5169b7e97
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Minor modifications
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2025-06-10 18:42:37 +02:00 |
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047a1b2d85
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Added scripts to analyse simulation data, now possible to extract spectral contrast, weight and autocorrelation.
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2025-06-07 16:39:00 +02:00 |
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4416bc58b6
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New analysis script - characterization of lattice geometries in real space
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2025-06-03 12:38:11 +02:00 |
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Karthik
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c87a142106
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Renamed script
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2025-05-31 03:09:30 +02:00 |
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Karthik
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d8675669d2
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Modified scripts for extracting g2
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2025-05-31 03:08:23 +02:00 |
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b31c0168ad
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Latest scripts - added g2 correlation analysis
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2025-05-30 21:02:24 +02:00 |
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c90c04249f
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Changed im2double to double to get original intensity counts without it being rescaled to within [0,1] - necessary for accurate OD determination at high intensity.
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2025-05-26 16:56:02 +02:00 |
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305335f519
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New additions, minor modifications to existing files
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2025-04-30 12:45:20 +02:00 |
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4918ee1ec0
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Updated Fourier analysis script, image plotting script.
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2025-04-23 15:33:57 +02:00 |
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