function plotHarmonicFit(Positions, TrappingPotential, TrapDepthsInKelvin, axis, popt, pcov) v = popt(1); dv = sqrt(pcov(1,1)); happrox = harmonic_potential(Positions(axis, :), popt); figure('Position', [100, 100, 1200, 600]) subplot(1,2,1) title('Fit to Potential') plot(Positions(axis, :), happrox, '-r', 'DisplayName', sprintf('\\nu = %.1f \\pm %.2f Hz', v, dv)) hold on plot(Positions(axis, :), TrappingPotential(axis, :), 'ob', 'DisplayName', 'Gaussian Potential') xlabel('Distance (\mum)', 'FontSize', 12, 'FontWeight', 'bold') ylabel('Trap Potential (\muK)', 'FontSize', 12, 'FontWeight', 'bold') ylim([-TrapDepthsInKelvin(1), max(TrappingPotential(axis, :))]) grid on legend('FontSize', 12, 'FontWeight', 'bold') subplot(1,2,2) title('Fit Residuals') plot(Positions(axis, :), TrappingPotential(axis, :) - happrox, 'ob') xlabel('Distance (\mum)', 'FontSize', 12, 'FontWeight', 'bold') ylabel('$U_{trap} - U_{Harmonic}$', 'Interpreter', 'latex', 'FontSize', 12, 'FontWeight', 'bold') xlim([-10, 10]) ylim([-1e-2, 1e-2]) grid on tight_layout() hold off end