From bc1c3e287a5c1a395d427f188f350a0d684a4474 Mon Sep 17 00:00:00 2001 From: Karthik Chandrashekara Date: Sat, 23 Aug 2025 21:23:33 +0200 Subject: [PATCH] Minor bugfixes from last commit. --- Data-Analyzer/+Analyzer/performAnalysis.m | 1 + Data-Analyzer/+Helper/batchAnalyze.m | 2 +- Data-Analyzer/+Helper/estimateDatasetMemory.m | 2 +- Data-Analyzer/+Scripts/BECToDropletsToStripes/runFullAnalysis.m | 2 +- 4 files changed, 4 insertions(+), 3 deletions(-) diff --git a/Data-Analyzer/+Analyzer/performAnalysis.m b/Data-Analyzer/+Analyzer/performAnalysis.m index dd634ad..f499179 100644 --- a/Data-Analyzer/+Analyzer/performAnalysis.m +++ b/Data-Analyzer/+Analyzer/performAnalysis.m @@ -41,6 +41,7 @@ function [results, scan_parameter_values] = performAnalysis(options) options.saveDirectory (1,:) char options.titleString (1,:) char options.font (1,:) char + options.SAVE_TO_WORKSPACE (1,1) logical end % Collect OD images diff --git a/Data-Analyzer/+Helper/batchAnalyze.m b/Data-Analyzer/+Helper/batchAnalyze.m index 3ae4f91..7a4dd01 100644 --- a/Data-Analyzer/+Helper/batchAnalyze.m +++ b/Data-Analyzer/+Helper/batchAnalyze.m @@ -10,7 +10,7 @@ function results_all = batchAnalyze(dataSources, options) end % ===== Estimate dataset memory and get per-run estimates ===== - [options.SAVE_TO_WORKSPACE, runMemoryGB] = estimateDatasetMemory(dataSources, options); + [options.SAVE_TO_WORKSPACE, runMemoryGB] = Helper.estimateDatasetMemory(dataSources, options); results_all = {}; % one element per folder diff --git a/Data-Analyzer/+Helper/estimateDatasetMemory.m b/Data-Analyzer/+Helper/estimateDatasetMemory.m index 086ab9b..9188d2f 100644 --- a/Data-Analyzer/+Helper/estimateDatasetMemory.m +++ b/Data-Analyzer/+Helper/estimateDatasetMemory.m @@ -56,7 +56,7 @@ function [SAVE_TO_WORKSPACE, runMemoryGB] = estimateDatasetMemory(dataSources, o runMemoryGB(end+1,1) = runBytes/1e9; % Decide workspace flag per run by comparing with 50% of available RAM - if runBytes > 0.5 * availableRAM + if runBytes > 0.75 * availableRAM SAVE_TO_WORKSPACE = false; fprintf('[INFO] Estimated size on memory of Run %s/%s too large (%.2f GB). Not saving to workspace.\n', ... ds.sequence, runID, runBytes/1e9); diff --git a/Data-Analyzer/+Scripts/BECToDropletsToStripes/runFullAnalysis.m b/Data-Analyzer/+Scripts/BECToDropletsToStripes/runFullAnalysis.m index c7b451e..40fb61a 100644 --- a/Data-Analyzer/+Scripts/BECToDropletsToStripes/runFullAnalysis.m +++ b/Data-Analyzer/+Scripts/BECToDropletsToStripes/runFullAnalysis.m @@ -4,7 +4,7 @@ dataSources = { struct('sequence', 'StructuralPhaseTransition', ... 'date', '2025/08/16', ... - 'runs', [8]) % specify run numbers as a string in "" or just as a numeric value + 'runs', [9]) % specify run numbers as a string in "" or just as a numeric value }; options = struct();