diff --git a/Data-Analyzer/+Scripts/BECToDropletsToStripes/runCorrelationAnalysis.m b/Data-Analyzer/+Scripts/BECToDropletsToStripes/runCorrelationAnalysis.m index 688d499..092907f 100644 --- a/Data-Analyzer/+Scripts/BECToDropletsToStripes/runCorrelationAnalysis.m +++ b/Data-Analyzer/+Scripts/BECToDropletsToStripes/runCorrelationAnalysis.m @@ -133,7 +133,7 @@ Plotter.plotODG2withAnalysis(od_imgs, scan_parameter_values, g2_analysis_results Plotter.plotMeanWithSE(scan_parameter_values, analysis_results.anisotropy_vals, ... 'Title', options.titleString, ... - 'YLim', [2,5], ... + 'YLim', [0,6], ... 'XLabel', '\alpha (degrees)', ... 'YLabel', 'Anisotropy of correlation peaks', ... 'FigNum', 1, ... @@ -156,9 +156,9 @@ Plotter.plotPDF(grouped_data, ... 'SkipSaveFigures', options.skipSaveFigures, ... 'SaveFileName', 'PDF_MaxG2AcrossTransition.fig', ... 'SaveDirectory', pwd, ... - 'NumberOfBins', 10, ... + 'NumberOfBins', 20, ... 'NormalizeHistogram', true, ... - 'DataRange', [0 1.0], ... + 'DataRange', [0 10], ... 'Colormap', @Colormaps.coolwarm, ... 'XLim', [min(scan_reference_values) max(scan_reference_values)]); diff --git a/Data-Analyzer/+Scripts/BECToStripesToDroplets/runCorrelationAnalysis.m b/Data-Analyzer/+Scripts/BECToStripesToDroplets/runCorrelationAnalysis.m index 7183c72..9600754 100644 --- a/Data-Analyzer/+Scripts/BECToStripesToDroplets/runCorrelationAnalysis.m +++ b/Data-Analyzer/+Scripts/BECToStripesToDroplets/runCorrelationAnalysis.m @@ -63,7 +63,7 @@ options.skipFullODImagesFolderUse = false; options.skipSaveData = false; options.skipSaveFigures = true; options.skipSaveProcessedOD = true; -options.skipLivePlot = false; +options.skipLivePlot = true; options.showProgressBar = true; @@ -121,7 +121,7 @@ analysis_results = Analyzer.analyzeG2Structures(g2_analysis_results, o %% Plot raw OD images and the corresponding real space g2 matrix options.skipLivePlot = true; -options.skipSaveFigures = false; +options.skipSaveFigures = true; saveDirectory = 'C:\Users\Karthik-OfficePC\Documents\GitRepositories\Calculations\Data-Analyzer\+Scripts'; Plotter.plotODG2withAnalysis(od_imgs, scan_parameter_values, g2_analysis_results, analysis_results, options, ... 'FontName', options.font, ... @@ -136,7 +136,7 @@ Plotter.plotODG2withAnalysis(od_imgs, scan_parameter_values, g2_analysis_results Plotter.plotMeanWithSE(scan_parameter_values, analysis_results.anisotropy_vals, ... 'Title', options.titleString, ... - 'YLim', [0,1], ... + 'YLim', [0,10], ... 'XLabel', '\alpha (degrees)', ... 'YLabel', 'Anisotropy of correlation peaks', ... 'FigNum', 1, ... @@ -159,9 +159,9 @@ Plotter.plotPDF(grouped_data, ... 'SkipSaveFigures', options.skipSaveFigures, ... 'SaveFileName', 'PDF_MaxG2AcrossTransition.fig', ... 'SaveDirectory', pwd, ... - 'NumberOfBins', 10, ... + 'NumberOfBins', 20, ... 'NormalizeHistogram', true, ... - 'DataRange', [0 1.0], ... + 'DataRange', [0 15], ... 'Colormap', @Colormaps.coolwarm, ... 'XLim', [min(scan_reference_values) max(scan_reference_values)]);