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Added heatmap plots of the different quantities

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Karthik 2025-07-11 01:07:26 +02:00
parent 195e65ec5f
commit 25e3bade5e
2 changed files with 89 additions and 14 deletions
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99
Data-Analyzer/extractQuantities.m
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@ -94,25 +94,100 @@ end
%% Plotting heatmap of mean_max_g2_values %% Plotting heatmap of mean_max_g2_values
N_x = length(options.scan_groups); N_x = length(options.scan_groups);
N_y = length(results_all) / N_x; N_y = length(results_all);
BFields = [2.35, 2.15, 2.0, 1.85, 1.7, 1.55, 1.4, 1.35];
% Preallocate % Preallocate
g2_matrix = zeros(N_y, N_x); g2_matrix = zeros(N_y, N_x);
angle_matrix = zeros(N_y, N_x);
for i = 1:length(results_all) for i = 1:N_y
row = ceil(i / N_x); % outer parameter (e.g., date) for j = 1:N_x
col = mod(i-1, N_x) + 1; % inner scan parameter g2_matrix(i, j) = results_all(i).mean_max_g2_values(j);
g2_matrix(row, col) = results_all(i).mean_max_g2_values(col); end
angle_matrix(row, col) = results_all(i).mean_max_g2_angle(col);
end end
% Plot heatmap % Plot heatmap
figure;
imagesc(options.scan_groups, 1:N_y, g2_matrix); font = 'Bahnschrift';
xlabel('Scan Parameter (e.g. Angle)');
ylabel('Scan Set Index'); figure(1)
title('Mean g_2 Value Heatmap'); clf
set(gcf,'Position',[50 50 950 750])
imagesc(options.scan_groups, BFields, g2_matrix);
colormap(sky);
clim([0, 1])
set(gca, 'FontSize', 14, 'YDir', 'normal');
hXLabel = xlabel('\alpha (degrees)', 'Interpreter', 'tex');
hYLabel = ylabel('BField (G)', 'Interpreter', 'tex');
hTitle = title('$\mathrm{max}[g^{(2)}_{[50,70]}(\delta\theta)]$', 'Interpreter', 'latex');
set([hXLabel, hYLabel], 'FontSize', 14)
set(hTitle, 'FontSize', 16, 'FontWeight', 'bold'); % Set font and size for title
colorbar; colorbar;
%% HEat map of angular spectral weight
N_x = length(options.scan_groups);
N_y = length(results_all);
BFields = [2.35, 2.15, 2.0, 1.85, 1.7, 1.55, 1.4, 1.35];
% Preallocate
angular_spectral_weight_matrix = zeros(N_y, N_x);
for i = 1:N_y
for j = 1:N_x
angular_spectral_weight_matrix(i, j) = results_all(i).angular_spectral_weight(j);
end
end
% Plot heatmap
font = 'Bahnschrift';
figure(2)
clf
set(gcf,'Position',[50 50 950 750])
imagesc(options.scan_groups, BFields, angular_spectral_weight_matrix);
colormap(sky);
set(gca, 'FontSize', 14, 'YDir', 'normal');
hXLabel = xlabel('\alpha (degrees)', 'Interpreter', 'tex');
hYLabel = ylabel('BField (G)', 'Interpreter', 'tex');
hTitle = title('Angular Spectral Weight');
set([hXLabel, hYLabel], 'FontSize', 14)
set(hTitle, 'FontName', font, 'FontSize', 16, 'FontWeight', 'bold'); % Set font and size for title
colorbar;
%% HEat map of radial spectral contrast
N_x = length(options.scan_groups);
N_y = length(results_all);
BFields = [2.35, 2.15, 2.0, 1.85, 1.7, 1.55, 1.4, 1.35];
% Preallocate
radial_spectral_contrast_matrix = zeros(N_y, N_x);
for i = 1:N_y
for j = 1:N_x
radial_spectral_contrast_matrix(i, j) = results_all(i).radial_spectral_contrast(j);
end
end
% Plot heatmap
font = 'Bahnschrift';
figure(2)
clf
set(gcf,'Position',[50 50 950 750])
imagesc(options.scan_groups, BFields, radial_spectral_contrast_matrix);
colormap(sky);
clim([0 0.005])
set(gca, 'FontSize', 14, 'YDir', 'normal');
hXLabel = xlabel('\alpha (degrees)', 'Interpreter', 'tex');
hYLabel = ylabel('BField (G)', 'Interpreter', 'tex');
hTitle = title('Radial Spectral Contrast');
set([hXLabel, hYLabel], 'FontSize', 14)
set(hTitle, 'FontName', font, 'FontSize', 16, 'FontWeight', 'bold'); % Set font and size for title
colorbar;

4
Data-Analyzer/plotImages.m
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@ -4,9 +4,9 @@ groupList = ["/images/MOT_3D_Camera/in_situ_absorption", "/images/ODT_1_Axi
"/images/ODT_2_Axis_Camera/in_situ_absorption", "/images/Horizontal_Axis_Camera/in_situ_absorption", ... "/images/ODT_2_Axis_Camera/in_situ_absorption", "/images/Horizontal_Axis_Camera/in_situ_absorption", ...
"/images/Vertical_Axis_Camera/in_situ_absorption"]; "/images/Vertical_Axis_Camera/in_situ_absorption"];
folderPath = "//DyLabNAS/Data/TwoDGas/2025/04/01/"; folderPath = "//DyLabNAS/Data/TwoDGas/2025/04/02/";
run = '0059'; run = '0007';
folderPath = strcat(folderPath, run); folderPath = strcat(folderPath, run);