# -*- coding: utf-8 -*- """ Created on Thu Mar 11 14:58:18 2021 @author: Nick Sauerwein """ import lyse import numpy as np from HelperClasses.Plotting import WidgetFakeColorPlot, MainPlotPanel, Widget1DLivingPlot from HelperClasses import DyTransition, Camera, AbsorptionImaging import cProfile import pstats profile = cProfile.Profile() profile.enable() figure_manager = lyse.figure_manager h5_paths = lyse.h5_paths() print(h5_paths) if lyse.spinning_top: # If so, use the filepath of the current shot h5_path = lyse.path else: # If not, get the filepath of the last shot of the lyse DataFrame h5_path = lyse.h5_paths().iloc[-1] if len(h5_paths): last_globals = run = lyse.Run(h5_paths.iloc[-1]).get_globals() if not hasattr(figure_manager, 'ap'): figure_manager.MainPlotPanel = MainPlotPanel.MainPlotPanel(h5_paths) # Add absorption imaging plot_name = '3D-MOT Absorption Imaging - With Atoms' if not plot_name in figure_manager.MainPlotPanel.plots: current_plotting = WidgetFakeColorPlot.WidgetFakeColorPlot(plot_name + '1', ('in_situ_absorption', 'atoms'), data_group='MOT_3D_Camera', Roi=False, colorbarText=False) figure_manager.MainPlotPanel.add_plot_dock(plot_name + '1', current_plotting) # plot_name = '3D-MOT Absorption Imaging - Without Atoms' # if not plot_name in figure_manager.MainPlotPanel.plots: # current_plotting = WidgetFakeColorPlot.WidgetFakeColorPlot(plot_name + '1', ('in_situ_absorption', 'background'), # data_group='MOT_3D_Camera', # Roi=False, colorbarText=False) # figure_manager.MainPlotPanel.add_plot_dock(plot_name + '1', current_plotting) # # plot_name = '3D-MOT Absorption Imaging - Dark' # if not plot_name in figure_manager.MainPlotPanel.plots: # current_plotting = WidgetFakeColorPlot.WidgetFakeColorPlot(plot_name + '1', ('in_situ_absorption', 'dark'), # data_group='MOT_3D_Camera', # Roi=False, colorbarText=False) # figure_manager.MainPlotPanel.add_plot_dock(plot_name + '1', current_plotting) # Add plotting for absorption imaging plot_name = '3D-MOT Absorption Imaging' if not plot_name in figure_manager.MainPlotPanel.plots: current_plotting = WidgetFakeColorPlot.WidgetFakeColorPlot(plot_name, ('absorption_imaging', 'absorption_imaging')) figure_manager.MainPlotPanel.add_plot_dock(plot_name, current_plotting) absorption_imaging_transition = DyTransition.creat_Dy421() mot_3D_camera = Camera.c11440_36u(absorption_imaging_transition['wavelength']) absorption_image = AbsorptionImaging.absorption_imaging(None, 'MOT_3D_Camera', 'in_situ_absorption', absorption_imaging_transition, mot_3D_camera, 0, 0) figure_manager.MainPlotPanel.analyse_panel.add_absorption_imaging(absorption_image, current_plotting) # Add realtime plotting for atom number # plot_name = '3D-MOT Atom Number' # if not plot_name in figure_manager.MainPlotPanel.plots: # current_plotting = Widget1DLivingPlot.Widget1DLivingPlot(plot_name, y_data_path=('absorption_imaging', 'atom_number'), y_in_results=True) # # figure_manager.MainPlotPanel.add_plot_dock(plot_name, current_plotting) figure_manager.MainPlotPanel.update_h5_paths(h5_paths) figure_manager.MainPlotPanel.refresh(h5_path) profile.disable() ps = pstats.Stats(profile) ps.sort_stats('cumtime') ps.print_stats(10)