Correct declaration of numerator and denominator in get_OD()
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@ -208,12 +208,12 @@ class ImageAnalyser():
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:rtype: numpy array
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:rtype: numpy array
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"""
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"""
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numerator = np.atleast_1d(imageBackground - imageDrak)
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denominator = np.atleast_1d(imageBackground - imageDrak)
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denominator = np.atleast_1d(imageAtom - imageDrak)
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numerator = np.atleast_1d(imageAtom - imageDrak)
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numerator[numerator == 0] = 1
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denominator[denominator == 0] = 1
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denominator[denominator == 0] = 1
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imageOD = np.abs(np.divide(denominator, numerator))
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numerator[numerator == 0] = 1
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imageOD = np.abs(np.divide(numerator, denominator))
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imageOD= -np.log(imageOD)
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imageOD= -np.log(imageOD)
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if len(imageOD) == 1:
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if len(imageOD) == 1:
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