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{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Import supporting package" ] }, { "cell_type": "code", "execution_count": 1, "metadata": {}, "outputs": [], "source": [ "import copy\n", "import glob\n", "from datetime import datetime\n", "\n", "# The package for data structure\n", "import xarray as xr\n", "import pandas as pd\n", "import numpy as np\n", "\n", "# The packages for working with uncertainties\n", "from uncertainties import ufloat\n", "from uncertainties import unumpy as unp\n", "from uncertainties import umath\n", "\n", "# The package for plotting\n", "import matplotlib.pyplot as plt\n", "plt.rcParams['font.size'] = 18 # Set the global font size\n", "\n", "# -------------- The modules written by us --------------\n", "\n", "# The packages for read data\n", "from DataContainer.ReadData import read_hdf5_file, read_hdf5_global, read_hdf5_run_time, read_csv_file\n", "\n", "# The packages for data analysis\n", "from Analyser.ImagingAnalyser import ImageAnalyser\n", "from Analyser.FitAnalyser import FitAnalyser\n", "from Analyser.FitAnalyser import ThomasFermi2dModel, DensityProfileBEC2dModel, Polylog22dModel\n", "from Analyser.FFTAnalyser import fft, ifft, fft_nutou\n", "from ToolFunction.ToolFunction import *\n", "\n", "# Add errorbar plot to xarray package\n", "from ToolFunction.HomeMadeXarrayFunction import errorbar, dataarray_plot_errorbar\n", "xr.plot.dataarray_plot.errorbar = errorbar\n", "xr.plot.accessor.DataArrayPlotAccessor.errorbar = dataarray_plot_errorbar" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Start a client for parallel computing" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [ { "data": { "text/html": [ "<div>\n", " <div style=\"width: 24px; height: 24px; background-color: #e1e1e1; border: 3px solid #9D9D9D; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <h3 style=\"margin-bottom: 0px;\">Client</h3>\n", " <p style=\"color: #9D9D9D; margin-bottom: 0px;\">Client-a0f7b9f2-47d6-11ee-9934-80e82ce2fa8e</p>\n", " <table style=\"width: 100%; text-align: left;\">\n", "\n", " <tr>\n", " \n", " <td style=\"text-align: left;\"><strong>Connection method:</strong> Cluster object</td>\n", " <td style=\"text-align: left;\"><strong>Cluster type:</strong> distributed.LocalCluster</td>\n", " \n", " </tr>\n", "\n", " \n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:8787/status\" target=\"_blank\">http://127.0.0.1:8787/status</a>\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " \n", "\n", " </table>\n", "\n", " \n", "\n", " \n", " <details>\n", " <summary style=\"margin-bottom: 20px;\"><h3 style=\"display: inline;\">Cluster Info</h3></summary>\n", " <div class=\"jp-RenderedHTMLCommon jp-RenderedHTML jp-mod-trusted jp-OutputArea-output\">\n", " <div style=\"width: 24px; height: 24px; background-color: #e1e1e1; border: 3px solid #9D9D9D; border-radius: 5px; position: absolute;\">\n", " </div>\n", " <div style=\"margin-left: 48px;\">\n", " <h3 style=\"margin-bottom: 0px; margin-top: 0px;\">LocalCluster</h3>\n", " <p style=\"color: #9D9D9D; margin-bottom: 0px;\">87faedbb</p>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard:</strong> <a href=\"http://127.0.0.1:8787/status\" target=\"_blank\">http://127.0.0.1:8787/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Workers:</strong> 8\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads:</strong> 128\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total memory:</strong> 149.01 GiB\n", " </td>\n", " </tr>\n", " \n", " <tr>\n", " <td style=\"text-align: left;\"><strong>Status:</strong> running</td>\n", " <td style=\"text-align: left;\"><strong>Using processes:</strong> True</td>\n", "</tr>\n", "\n", " \n", " </table>\n", "\n", " <details>\n", " <summary style=\"margin-bottom: 20px;\">\n", " <h3 style=\"display: inline;\">Scheduler Info</h3>\n", " </summary>\n", "\n", " <div style=\"\">\n", " <div>\n", " <div style=\"width: 24px; height: 24px; background-color: #FFF7E5; border: 3px solid #FF6132; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <h3 style=\"margin-bottom: 0px;\">Scheduler</h3>\n", " <p style=\"color: #9D9D9D; margin-bottom: 0px;\">Scheduler-a513fd59-1c45-4ed7-9a0d-004b539a3d74</p>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm:</strong> tcp://127.0.0.1:57821\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Workers:</strong> 8\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard:</strong> <a href=\"http://127.0.0.1:8787/status\" target=\"_blank\">http://127.0.0.1:8787/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads:</strong> 128\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Started:</strong> Just now\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total memory:</strong> 149.01 GiB\n", " </td>\n", " </tr>\n", " </table>\n", " </div>\n", " </div>\n", "\n", " <details style=\"margin-left: 48px;\">\n", " <summary style=\"margin-bottom: 20px;\">\n", " <h3 style=\"display: inline;\">Workers</h3>\n", " </summary>\n", "\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 0</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57860\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57862/status\" target=\"_blank\">http://127.0.0.1:57862/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57824\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-u0oiik41\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 1</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57865\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57867/status\" target=\"_blank\">http://127.0.0.1:57867/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57825\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-6p1lkbjg\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 2</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57872\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57875/status\" target=\"_blank\">http://127.0.0.1:57875/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57826\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-g2r1nnmm\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 3</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57871\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57873/status\" target=\"_blank\">http://127.0.0.1:57873/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57827\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-k_l96nv4\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 4</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57866\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57869/status\" target=\"_blank\">http://127.0.0.1:57869/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57828\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-6kiubqa3\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 5</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57859\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57861/status\" target=\"_blank\">http://127.0.0.1:57861/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57829\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-kl7vhday\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 6</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57852\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57857/status\" target=\"_blank\">http://127.0.0.1:57857/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57830\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-6ldt7csc\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", " <div style=\"margin-bottom: 20px;\">\n", " <div style=\"width: 24px; height: 24px; background-color: #DBF5FF; border: 3px solid #4CC9FF; border-radius: 5px; position: absolute;\"> </div>\n", " <div style=\"margin-left: 48px;\">\n", " <details>\n", " <summary>\n", " <h4 style=\"margin-bottom: 0px; display: inline;\">Worker: 7</h4>\n", " </summary>\n", " <table style=\"width: 100%; text-align: left;\">\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Comm: </strong> tcp://127.0.0.1:57877\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Total threads: </strong> 16\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Dashboard: </strong> <a href=\"http://127.0.0.1:57878/status\" target=\"_blank\">http://127.0.0.1:57878/status</a>\n", " </td>\n", " <td style=\"text-align: left;\">\n", " <strong>Memory: </strong> 18.63 GiB\n", " </td>\n", " </tr>\n", " <tr>\n", " <td style=\"text-align: left;\">\n", " <strong>Nanny: </strong> tcp://127.0.0.1:57831\n", " </td>\n", " <td style=\"text-align: left;\"></td>\n", " </tr>\n", " <tr>\n", " <td colspan=\"2\" style=\"text-align: left;\">\n", " <strong>Local directory: </strong> C:\\Users\\data\\AppData\\Local\\Temp\\dask-worker-space\\worker-wyfsi6_i\n", " </td>\n", " </tr>\n", "\n", " \n", "\n", " \n", "\n", " </table>\n", " </details>\n", " </div>\n", " </div>\n", " \n", "\n", " </details>\n", "</div>\n", "\n", " </details>\n", " </div>\n", "</div>\n", " </details>\n", " \n", "\n", " </div>\n", "</div>" ], "text/plain": [ "<Client: 'tcp://127.0.0.1:57821' processes=8 threads=128, memory=149.01 GiB>" ] }, "execution_count": 2, "metadata": {}, "output_type": "execute_result" } ], "source": [ "from dask.distributed import Client\n", "client = Client(n_workers=8, threads_per_worker=16, processes=True, memory_limit='20GB')\n", "client" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Set global path for experiment" ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, "outputs": [], "source": [ "groupList = [\n", " \"images/MOT_3D_Camera/in_situ_absorption\",\n", " \"images/ODT_1_Axis_Camera/in_situ_absorption\",\n", " \"images/ODT_2_Axis_Camera/in_situ_absorption\",\n", "]\n", "\n", "dskey = {\n", " \"images/MOT_3D_Camera/in_situ_absorption\": \"camera_0\",\n", " \"images/ODT_1_Axis_Camera/in_situ_absorption\": \"camera_1\",\n", " \"images/ODT_2_Axis_Camera/in_situ_absorption\": \"camera_2\",\n", "}\n" ] }, { "cell_type": "code", "execution_count": 4, "metadata": {}, "outputs": [], "source": [ "# img_dir = 'C:/Users/control/DyLab/Experiments/DyBEC/'\n", "img_dir = '//DyLabNAS/Data/'\n", "SequenceName = \"Evaporative_Cooling\"\n", "folderPath = img_dir + SequenceName + \"/\" + '2023/07/03'# get_date()" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# Load data" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## along x-axis" ] }, { "cell_type": "code", "execution_count": 5, "metadata": {}, "outputs": [], "source": [ "compX = xr.open_zarr(\"./compX.zarr\")\n", "compY = xr.open_zarr(\"./compY.zarr\")\n", "compZ = xr.open_zarr(\"./compZ.zarr\")" ] }, { "cell_type": "code", "execution_count": 6, "metadata": {}, "outputs": [], "source": [ "B = np.sqrt((compX['als_final_current'] * 9.52 -0.164)**2 + (0.435**2 - 0.164**2))\n", "compX['als_final_current'] = B\n", "compX['als_final_current'] = B" ] }, { "cell_type": "code", "execution_count": 7, "metadata": {}, "outputs": [], "source": [ "B = np.sqrt((compY['als_final_current'] * 10.3 + 0.202)**2 + (0.440**2 - 0.202**2))\n", "compY['als_final_current'] = B\n", "compY['als_final_current'] = B" ] }, { "cell_type": "code", "execution_count": 8, "metadata": {}, "outputs": [], "source": [ "B = np.sqrt((compZ['als_final_current'] * 10.6021 + 0.3254)**2 + (0.4333**2 - 0.3254**2))\n", "compZ['als_final_current'] = B\n", "compZ['als_final_current'] = B" ] }, { "cell_type": "code", "execution_count": 9, "metadata": {}, "outputs": [ { "data": { "image/png": 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"text/plain": [ "<Figure size 2400x600 with 1 Axes>" ] }, "metadata": {}, "output_type": "display_data" } ], "source": [ "import matplotlib.patches as patches\n", "\n", "B0 = [1.2950, 1.3060, 2.1740, 2.3360, 2.5910, 2.7400, 2.8030, 2.7800, 3.3570, 4.9490, 5.0830]# , 7.1720, 7.2040, 7.1340]\n", "B0_width = [0.0090, 0.0100, 0.0005, 0.0005, 0.0010, 0.0005, 0.0210, 0.0150, 0.0430, 0.0005, 0.1300]# , 0.0240, 0.0005, 0.0360]\n", "\n", "fig = plt.figure(figsize=(24,6))\n", "ax = fig.gca()\n", "compX['OD'].plot.errorbar(ax=ax, yerr = compX['std'], fmt='or', label='X coil')\n", "compY['OD'].plot.errorbar(ax=ax, yerr = compY['std'], fmt='og', label='Y coil')\n", "compZ['OD'].plot.errorbar(ax=ax, yerr = compZ['std'], fmt='ob', label='Z coil')\n", "\n", "for i in range(len(B0)):\n", " rect = patches.Rectangle((B0[i] - B0_width[i], 000), B0_width[i]*2, 4000, linewidth=1, edgecolor='r', facecolor='r', alpha=0.4)\n", " ax.add_patch(rect)\n", "\n", "plt.legend()\n", "\n", "plt.ylim([0, 4500])\n", "plt.ylabel('NCount')\n", "plt.xlabel('B (G)')\n", "plt.tight_layout()\n", "plt.grid(visible=1)\n", "plt.show()" ] }, { "cell_type": "code", "execution_count": 24, "metadata": {}, "outputs": [], "source": [ "# CompX\n", "f = [0.54427 , 0.36366 , 0.30532, 0.29893 , 0.28320 , 0.25629 , 0.23891 , 0.147] \n", "df = [0.00046 , 0.00010 ,0.00013 , 0.00011 , 0.00004 , 0.00407 , 0.01, 0.01]\n", "B = [5.0830, 3.3570, (2.8030 + 2.7800)/2, 2.7400, 2.5910, 2.3360, 2.1740, (1.2950 + 1.3060)/2]\n", "\n", "f = unp.uarray(f, df)\n", "f = unp.sqrt((f * 9.52 -0.164)**2 + (0.435**2 - 0.164**2))\n", "\n", "unp.nominal_values(f)\n", "\n", "CompX_peak_val = xr.DataArray(\n", " data=unp.nominal_values(f),\n", " dims='x',\n", " coords=dict(x=np.arange(7, -1, -1))\n", ")\n", "\n", "CompX_peak_std = xr.DataArray(\n", " data=unp.std_devs(f),\n", " dims='x',\n", " coords=dict(x=np.arange(7, -1, -1))\n", ")" ] }, { "cell_type": "code", "execution_count": 25, "metadata": {}, "outputs": [], "source": [ "# CompY\n", "f = [0.47870 , 0.31417 ,0.26099 ,0.25506 ,0.24090 ,0.21583 ,0.20091 ,0.1165] \n", "df = [0.00036 ,0.00010 ,0.00017 ,0.00041 ,0.00003 ,0.00015 ,0.00726 ,0.001]\n", "B = [(1.2950 + 1.3060)/2, 2.1740, 2.3360, 2.5910, 2.7400, (2.8030 + 2.7800)/2, 3.3570, 5.0830]\n", "\n", "f = unp.uarray(f, df)\n", "f = unp.sqrt((f * 10.3 + 0.202)**2 + (0.440**2 - 0.202**2))\n", "\n", "unp.nominal_values(f)\n", "\n", "CompY_peak_val = xr.DataArray(\n", " data=unp.nominal_values(f),\n", " dims='x',\n", " coords=dict(x=np.arange(7, -1, -1))\n", ")\n", "\n", "CompY_peak_std = xr.DataArray(\n", " data=unp.std_devs(f),\n", " dims='x',\n", " coords=dict(x=np.arange(7, -1, -1))\n", ")" ] }, { "cell_type": "code", "execution_count": 34, "metadata": {}, "outputs": [], "source": [ "# CompZ\n", "f = [0.44224, 0.28128, 0.22367, 0.22962, 0.21004, 0.18586, 0.17055, 0.0903] \n", "df = [0.00038, 0.00016, 0.01, 0.00013, 0.00012, 0.00021, 0.00175, 0]\n", "B = [(1.2950 + 1.3060)/2, 2.1740, 2.3360, 2.5910, 2.7400, (2.8030 + 2.7800)/2, 3.3570, 5.0830]\n", "\n", "f = unp.uarray(f, df)\n", "f = unp.sqrt((f * 10.6021 + 0.3254)**2 + (0.4333**2 - 0.3254**2))\n", "\n", "unp.nominal_values(f)\n", "\n", "CompZ_peak_val = xr.DataArray(\n", " data=unp.nominal_values(f),\n", " dims='x',\n", " coords=dict(x=np.arange(7, -1, -1))\n", ")\n", "\n", "CompZ_peak_std = xr.DataArray(\n", " data=unp.std_devs(f),\n", " dims='x',\n", " coords=dict(x=np.arange(7, -1, -1))\n", ")" ] }, { "cell_type": "code", "execution_count": 52, "metadata": {}, "outputs": [ { "data": { "image/png": "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 "text/plain": [ "<Figure size 640x480 with 1 Axes>" ] }, "metadata": {}, "output_type": "display_data" } ], "source": [ "B = [(1.2950 + 1.3060)/2, 2.1740, 2.3360, 2.5910, 2.7400, (2.8030 + 2.7800)/2, 3.3570, 5.0830]\n", "B_width = [(0.0090 + 0.0100)/2, 0.0005, 0.0005, 0.0010, 0.0005, (0.0210 + 0.0150)/2, 0.0430, 0.1300]# , 0.0240, 0.0005, 0.0360]\n", "\n", "Ref_peak_val = xr.DataArray(\n", " data=unp.nominal_values(B),\n", " dims='x',\n", " coords=dict(x=np.arange(8))\n", ")\n", "\n", "Ref_peak_std = xr.DataArray(\n", " data=unp.std_devs(B_width),\n", " dims='x',\n", " coords=dict(x=np.arange(8))\n", ")\n", "\n", "fig = plt.figure()\n", "ax = fig.gca()\n", "\n", "Ref_peak_val.plot.errorbar(ax=ax, yerr=Ref_peak_std, fmt='ok', label='Reference', markersize=6, alpha=0.6)\n", "CompX_peak_val.plot.errorbar(ax=ax, yerr=CompX_peak_std, fmt='Xr', label='X coil', markersize=8, alpha=0.6)\n", "CompY_peak_val.plot.errorbar(ax=ax, yerr=CompY_peak_std, fmt='sg', label='Y coil', markersize=6, alpha=0.6)\n", "CompZ_peak_val.plot.errorbar(ax=ax, yerr=CompZ_peak_std, fmt='db', label='Z coil', markersize=6, alpha=0.6)\n", "\n", "plt.legend()\n", "\n", "plt.ylim([1, 6])\n", "plt.ylabel('B (G)')\n", "plt.xlabel('Peak index')\n", "plt.tight_layout()\n", "plt.grid(visible=1)\n", "\n", "plt.show()" ] }, { "cell_type": "code", "execution_count": 61, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "array([5.1475, 3.4601, 2.9165, 2.856 , 2.7116, 2.4564, 2.3048, 1.4554])" ] }, "execution_count": 61, "metadata": {}, "output_type": "execute_result" } ], "source": [ "np.round(CompY_peak_val.to_numpy(), 4)" ] }, { "cell_type": "code", "execution_count": 62, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "array([0.0037, 0.001 , 0.0017, 0.0042, 0.0003, 0.0015, 0.0737, 0.0099])" ] }, "execution_count": 62, "metadata": {}, "output_type": "execute_result" } ], "source": [ "np.round(CompY_peak_std.to_numpy(), 4)" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [] } ], "metadata": { "kernelspec": { "display_name": "base", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.9.12" }, "orig_nbformat": 4 }, "nbformat": 4, "nbformat_minor": 2}
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